STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCM_021410Cell wall / vacuolar inhibitor of fructosidase 1, putative. (173 aa)    
Predicted Functional Partners:
TCM_001178
Uncharacterized protein.
  
     0.512
TCM_003962
Uncharacterized protein.
  
     0.510
TCM_041800
ROTUNDIFOLIA like 4.
  
     0.486
TCM_006183
Ubiquitin carboxyl-terminal hydrolase family protein.
  
     0.478
TCM_011375
F-box/RNI-like superfamily protein isoform 1.
  
     0.475
TCM_029271
ROTUNDIFOLIA like 9.
  
     0.461
TCM_002907
Ubiquitin carboxyl-terminal hydrolase family protein isoform 1.
  
     0.458
TCM_043214
Ubiquitin carboxyl-terminal hydrolase family protein.
  
     0.457
TCM_008721
F17L21.8, putative.
  
     0.445
TCM_020090
Ubiquitin carboxyl-terminal hydrolase family protein.
  
     0.440
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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