STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCM_025326Uncharacterized protein. (238 aa)    
Predicted Functional Partners:
TCM_032573
Ubiquitin carboxyl-terminal hydrolase family protein.
  
     0.523
TCM_029207
Uncharacterized protein isoform 5.
  
     0.504
TCM_006996
Pentatricopeptide repeat-containing protein isoform 1.
  
     0.497
TCM_002907
Ubiquitin carboxyl-terminal hydrolase family protein isoform 1.
  
     0.491
TCM_030527
RNA polymerase II elongation factor ELL3 isoform 1.
  
     0.491
TCM_020094
Cysteine/Histidine-rich C1 domain family protein, putative.
  
     0.486
TCM_031175
Plastid developmental protein DAG.
  
     0.486
TCM_027772
Gb:AAF36750.1, putative isoform 1.
  
     0.486
TCM_020096
Ubiquitin carboxyl-terminal hydrolase family protein.
  
     0.478
TCM_035439
Uncharacterized protein.
  
     0.475
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.