STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDT98543.1Putative protein-disulfide isomerase. (214 aa)    
Predicted Functional Partners:
SDT98527.1
UPF0176 protein; Belongs to the UPF0176 family.
       0.622
SDT98557.1
High affinity sulphate transporter 1.
       0.556
SDT98503.1
Hypothetical protein.
       0.463
SDT98515.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
       0.463
SDT98576.1
Hypothetical protein.
       0.441
Your Current Organism:
Pseudomonas pohangensis
NCBI taxonomy Id: 364197
Other names: DSM 17875, KACC 11517, P. pohangensis, Pseudomonas pohangensis Weon et al. 2006 emend. Hameed et al. 2014, strain H3-R18
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.