STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES98437.1Hypothetical protein. (211 aa)    
Predicted Functional Partners:
SES98403.1
Paraquat-inducible protein B.
 
   
 0.973
SES98331.1
Paraquat-inducible protein A.
 
  
 0.964
SES98361.1
Paraquat-inducible protein A.
 
  
 0.962
SES98295.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 
     0.708
SES98264.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.605
SET46296.1
8-oxo-dGTP diphosphatase.
  
     0.555
SET53002.1
Hypothetical protein.
  
     0.542
SES98169.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
 
     0.517
SES98226.1
Hypothetical protein.
       0.506
SET36131.1
Chromosome partitioning protein, ParB family.
  
     0.502
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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