STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAD-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (386 aa)    
Predicted Functional Partners:
uxaC
D-glucuronate isomerase.
 
  
 0.982
SET33399.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
 
 
 0.939
SET31515.1
2-keto-3-deoxygluconate kinase.
 
  
 0.852
SET33553.1
Beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.851
SEU05848.1
Tagaturonate reductase.
 
 
 0.830
SET97572.1
2-keto-3-deoxygluconate kinase.
    
 0.806
SET33529.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
     0.737
SET33586.1
Transcriptional regulator, GntR family.
     
 0.734
SET22357.1
Mannitol 2-dehydrogenase.
 
 
 0.686
SET33426.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
     0.676
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.