STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET52206.1YKOF-related Family. (203 aa)    
Predicted Functional Partners:
SET52119.1
ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein.
 
     0.911
SET52143.1
NitT/TauT family transport system ATP-binding protein.
 
     0.880
SET52172.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
     0.844
SET52067.1
Hypothetical protein.
       0.466
SET52091.1
Hypothetical protein.
       0.466
SET45495.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.