Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SET68382.1 | SET68414.1 | SAMN04489858_10856 | SAMN04489858_10857 | Anti-sigma-K factor RskA. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.965 |
SET68382.1 | SET68439.1 | SAMN04489858_10856 | SAMN04489858_10858 | Anti-sigma-K factor RskA. | Cobaltochelatase CobS subunit. | 0.630 |
SET68382.1 | SET68462.1 | SAMN04489858_10856 | SAMN04489858_10859 | Anti-sigma-K factor RskA. | Hypothetical protein. | 0.532 |
SET68414.1 | SET68382.1 | SAMN04489858_10857 | SAMN04489858_10856 | RNA polymerase sigma-70 factor, ECF subfamily. | Anti-sigma-K factor RskA. | 0.965 |
SET68414.1 | SET68439.1 | SAMN04489858_10857 | SAMN04489858_10858 | RNA polymerase sigma-70 factor, ECF subfamily. | Cobaltochelatase CobS subunit. | 0.559 |
SET68414.1 | SET68462.1 | SAMN04489858_10857 | SAMN04489858_10859 | RNA polymerase sigma-70 factor, ECF subfamily. | Hypothetical protein. | 0.532 |
SET68439.1 | SET68382.1 | SAMN04489858_10858 | SAMN04489858_10856 | Cobaltochelatase CobS subunit. | Anti-sigma-K factor RskA. | 0.630 |
SET68439.1 | SET68414.1 | SAMN04489858_10858 | SAMN04489858_10857 | Cobaltochelatase CobS subunit. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.559 |
SET68439.1 | SET68462.1 | SAMN04489858_10858 | SAMN04489858_10859 | Cobaltochelatase CobS subunit. | Hypothetical protein. | 0.785 |
SET68439.1 | SET68488.1 | SAMN04489858_10858 | SAMN04489858_10860 | Cobaltochelatase CobS subunit. | Hint domain-containing protein. | 0.504 |
SET68439.1 | SET68509.1 | SAMN04489858_10858 | SAMN04489858_10861 | Cobaltochelatase CobS subunit. | Cobaltochelatase CobT subunit. | 0.994 |
SET68462.1 | SET68382.1 | SAMN04489858_10859 | SAMN04489858_10856 | Hypothetical protein. | Anti-sigma-K factor RskA. | 0.532 |
SET68462.1 | SET68414.1 | SAMN04489858_10859 | SAMN04489858_10857 | Hypothetical protein. | RNA polymerase sigma-70 factor, ECF subfamily. | 0.532 |
SET68462.1 | SET68439.1 | SAMN04489858_10859 | SAMN04489858_10858 | Hypothetical protein. | Cobaltochelatase CobS subunit. | 0.785 |
SET68462.1 | SET68488.1 | SAMN04489858_10859 | SAMN04489858_10860 | Hypothetical protein. | Hint domain-containing protein. | 0.504 |
SET68462.1 | SET68509.1 | SAMN04489858_10859 | SAMN04489858_10861 | Hypothetical protein. | Cobaltochelatase CobT subunit. | 0.419 |
SET68488.1 | SET68439.1 | SAMN04489858_10860 | SAMN04489858_10858 | Hint domain-containing protein. | Cobaltochelatase CobS subunit. | 0.504 |
SET68488.1 | SET68462.1 | SAMN04489858_10860 | SAMN04489858_10859 | Hint domain-containing protein. | Hypothetical protein. | 0.504 |
SET68488.1 | SET68509.1 | SAMN04489858_10860 | SAMN04489858_10861 | Hint domain-containing protein. | Cobaltochelatase CobT subunit. | 0.624 |
SET68509.1 | SET68439.1 | SAMN04489858_10861 | SAMN04489858_10858 | Cobaltochelatase CobT subunit. | Cobaltochelatase CobS subunit. | 0.994 |
page 1 of 2