STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET76529.1N-carbamoyl-L-amino-acid hydrolase. (422 aa)    
Predicted Functional Partners:
SET76549.1
Dihydropyrimidinase.
 
 
 0.983
SET76787.1
Dihydroorotate oxidase B, catalytic subunit.
 
 0.892
SET76764.1
Glutamate synthase (NADPH/NADH) small chain.
 
 
  0.777
SET76641.1
NitT/TauT family transport system substrate-binding protein.
 
     0.742
SET62731.1
OHCU decarboxylase.
  
 0.739
SET76504.1
Transcriptional regulator, TetR family.
 
     0.739
SET76567.1
NitT/TauT family transport system ATP-binding protein.
 
     0.732
SET62700.1
(S)-ureidoglycine aminohydrolase.
 
 
 0.730
SET76592.1
NitT/TauT family transport system permease protein.
 
     0.722
SET76620.1
NitT/TauT family transport system permease protein.
 
     0.680
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.