STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET84864.1Chromosome partitioning protein, ParB family; Belongs to the ParB family. (309 aa)    
Predicted Functional Partners:
SET84838.1
Plasmid partitioning protein RepA.
 
 
 0.976
SET84882.1
Replication initiation protein RepC.
 
   
 0.902
SET36152.1
Cellulose biosynthesis protein BcsQ.
 
 
 0.775
SEU08002.1
HTH DNA binding domain-containing protein.
  
     0.756
SET97788.1
HTH DNA binding domain-containing protein.
  
     0.755
SET84769.1
Hypothetical protein.
  
     0.752
SEU07974.1
Chromosome partitioning protein.
 
 
 0.732
SET35045.1
HTH DNA binding domain-containing protein.
  
     0.721
SET85138.1
Replication protein C N-terminal domain-containing protein.
  
   
 0.699
SET85977.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.694
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.