STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET93235.1Peptide/nickel transport system ATP-binding protein. (463 aa)    
Predicted Functional Partners:
SET93217.1
Peptide/nickel transport system permease protein.
  
  0.932
SET93193.1
Peptide/nickel transport system permease protein.
 
  
  0.926
SET93173.1
Peptide/nickel transport system substrate-binding protein.
 
  
  0.903
SET93036.1
Peptide/nickel transport system permease protein.
  
  0.785
SET93022.1
Peptide/nickel transport system permease protein.
 
  
  0.749
SET51856.1
Microcin C transport system permease protein.
     0.646
SET93107.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.636
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.626
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.610
SET93144.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.610
Your Current Organism:
Paracoccus homiensis
NCBI taxonomy Id: 364199
Other names: DSM 17862, KACC 11518, P. homiensis, Paracoccus homiensis Kim et al. 2006, Paracoccus sp. E33, strain DD-R11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.