STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV87878.1Transcriptional regulator, LacI family. (333 aa)    
Predicted Functional Partners:
SEW41889.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.929
SEV87858.1
Multiple sugar transport system substrate-binding protein.
 
     0.766
SEV87841.1
Multiple sugar transport system permease protein.
 
     0.642
SEV87822.1
Multiple sugar transport system permease protein.
 
     0.609
SEW32150.1
Transcriptional regulator, LacI family.
  
     0.594
SEW46442.1
Phosphocarrier protein.
   
 
 0.539
SEV87781.1
Trehalase.
 
     0.437
SEV87895.1
Hypothetical protein.
       0.433
SEV87805.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.424
SEW47099.1
Threonine dehydrogenase.
  
 
   0.424
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.