STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV88141.1PRC-barrel domain-containing protein. (266 aa)    
Predicted Functional Partners:
SEW19094.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.669
SEW18977.1
Hypothetical protein.
  
     0.636
SEW46225.1
Response regulator receiver domain-containing protein.
  
    0.606
SEW19029.1
Response regulator receiver protein.
 
    0.593
SEV88162.1
Predicted PurR-regulated permease PerM.
 
     0.585
SEW18996.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
    0.532
SEW46217.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
    0.499
SEW45811.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
  
    0.495
SEW19312.1
Putative membrane protein.
  
     0.484
SEV97823.1
PAS domain S-box-containing protein.
 
    0.478
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.