STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV88198.1iron(III) transport system substrate-binding protein. (344 aa)    
Predicted Functional Partners:
SEV88218.1
iron(III) transport system permease protein.
 
 
 0.997
fbpC
iron(III) transport system ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 
 0.973
SEW19935.1
iron(III) transport system permease protein.
  
 
 0.954
SEW06542.1
iron(III) transport system substrate-binding protein.
     
 0.832
SEW43950.1
Thiamine transport system permease protein.
  
 
 0.723
SEW43274.1
Sugar phosphate permease.
  
  
 0.645
potA
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
 
 0.588
SEW02536.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.588
SEW11006.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.588
SEW17989.1
Putative spermidine/putrescine transport system ATP-binding protein.
  
 
 0.588
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.