STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV88570.1Uncharacterized conserved protein, DUF58 family, contains vWF domain. (436 aa)    
Predicted Functional Partners:
SEV88535.1
Uncharacterized membrane protein YckC, RDD family.
 
    0.966
SEV88589.1
MoxR-like ATPase.
  
 0.964
SEV88553.1
Uncharacterized membrane protein SpoIIM, required for sporulation.
 
  
 0.959
SEV88606.1
Hypothetical protein.
       0.813
SEV88625.1
Hypothetical protein.
       0.813
SEV88647.1
Uncharacterized membrane protein YhaH, DUF805 family.
       0.783
SEW30823.1
MoxR-like ATPase.
  
 0.752
SEV88480.1
Transglutaminase-like enzyme, putative cysteine protease.
  
    0.722
SEV88499.1
Uncharacterized conserved protein, Alpha-E superfamily.
       0.639
SEV88517.1
Uncharacterized conserved protein, circularly permuted ATPgrasp superfamily.
       0.639
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.