STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV91115.1Glyoxylase, beta-lactamase superfamily II. (265 aa)    
Predicted Functional Partners:
SEV91093.1
Quinol monooxygenase YgiN.
 
    0.965
SEV91047.1
Predicted dehydrogenase.
 
    0.874
SEV91068.1
3-isopropylmalate dehydrogenase.
 
     0.856
SEV91024.1
Transcriptional regulator, GntR family.
 
     0.755
SEW07394.1
Uncharacterized conserved protein YcbK, DUF882 family.
  
    0.619
SEW28312.1
Regulatory protein, luxR family.
    
   0.575
SEW12085.1
Hypothetical protein.
  
  0.570
SEW32415.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.528
SEW26188.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
 
   0.511
SEW06007.1
Rhodanese-related sulfurtransferase.
   
  0.455
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.