STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV91629.1Capsular polysaccharide transport system ATP-binding protein. (219 aa)    
Predicted Functional Partners:
SEV91607.1
Capsular polysaccharide transport system permease protein.
 
 
 0.998
SEW43483.1
Capsular polysaccharide transport system permease protein.
 
 0.997
SEW42468.1
ABC-type polysaccharide/polyol phosphate export permease.
 
 0.996
SEV98685.1
Capsular polysaccharide export protein.
 
  
 0.960
SEW43467.1
Capsule polysaccharide export protein KpsE/RkpR.
 
 
 0.948
SEV98706.1
Polysaccharide export outer membrane protein.
 
  
 0.902
kdsA
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase); Belongs to the KdsA family.
  
    0.854
SEW42411.1
Glycosyl transferase family 2.
 
  
 0.811
SEV98726.1
Capsular polysaccharide export protein.
 
   
 0.794
SEW31382.1
Core-2/I-Branching enzyme.
 
  
 0.765
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.