STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV92517.1Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (334 aa)    
Predicted Functional Partners:
SEV92475.1
Oligopeptide transport system permease protein.
 
  0.998
SEV92429.1
Oligopeptide transport system substrate-binding protein.
 
 0.997
SEW01247.1
Peptide/nickel transport system permease protein.
 
  0.991
SEW43548.1
Peptide/nickel transport system permease protein.
 
  0.990
SEW40430.1
Peptide/nickel transport system permease protein.
 
  0.989
SEV92451.1
Oligopeptide transport system permease protein.
 
  0.980
SEW42624.1
Peptide/nickel transport system permease protein.
 
  0.924
SEV92496.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.910
SEW40440.1
Peptide/nickel transport system permease protein.
 
  0.906
SEW01270.1
Peptide/nickel transport system permease protein.
 
  0.897
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.