STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV93286.1Beta-fructofuranosidase. (327 aa)    
Predicted Functional Partners:
SEV93307.1
Multiple sugar transport system permease protein.
 
     0.951
SEV93329.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-).
 
    0.946
SEV93371.1
Transcriptional regulator, LacI family.
 
 
 0.906
SEV93351.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.905
SEW37909.1
Alpha-galactosidase.
 
  
 0.895
SEW25143.1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.886
SEW13314.1
Beta-glucosidase.
   
 
 0.815
SEV93263.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.
 
    0.803
SEW30241.1
Amylosucrase.
 
 
 0.753
SEW13206.1
Alpha-glucosidase.
  
 
 0.710
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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