STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV94683.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
SEV94635.1
SAM-dependent methyltransferase, MidA family.
 
     0.773
SEV94613.1
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
 
     0.763
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.733
SEW27515.1
SH3-like domain-containing protein.
  
     0.623
SEV94795.1
Hypothetical protein.
 
     0.572
SEW12193.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.528
SEW20850.1
Cobaltochelatase CobT subunit.
  
     0.507
SEV97636.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.498
SEV97661.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
     0.494
SEV98656.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.468
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.