STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV97144.1Transcriptional regulator, MerR family. (133 aa)    
Predicted Functional Partners:
SEW41889.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.759
SEV97096.1
Hypothetical protein.
       0.699
SEV97172.1
Transcriptional regulator, MerR family.
 
    
0.665
SEV97122.1
acyl-CoA dehydrogenase.
  
    0.641
SEV93898.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.628
SEW44646.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
    
 0.628
SEW44683.1
Diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.628
SEW26607.1
PAS/PAC sensor hybrid histidine kinase.
    
 0.619
SEW20768.1
DnaJ domain-containing protein.
  
 
 0.612
dnaJ
Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]
  
 
 0.612
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.