STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEV97979.1Glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase. (159 aa)    
Predicted Functional Partners:
SEV97959.1
Hypothetical protein.
       0.773
SEV87622.1
PhnB protein.
 
  
 0.748
ubiG
3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
   
 
  0.692
SEV98009.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.691
SEV98030.1
Transcriptional regulator, TetR family.
 
     0.673
SEW46042.1
Hypothetical protein.
   
    0.585
SEW29904.1
Hypothetical protein.
 
     0.479
SEW37584.1
Uncharacterized conserved protein YbaA, DUF1428 family.
 
     0.449
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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