STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02494.1Hint domain-containing protein. (330 aa)    
Predicted Functional Partners:
SEV92339.1
Pectate lyase superfamily protein.
  
  0.798
SEW42400.1
Core-2/I-Branching enzyme.
  
     0.765
SEW42389.1
Hypothetical protein.
  
     0.757
SEW22155.1
Putative peptidoglycan binding domain-containing protein.
  
  
  0.753
SEW46022.1
Hypothetical protein.
  
     0.747
SEW39511.1
Hypothetical protein.
  
     0.736
SEW39500.1
Hypothetical protein.
  
     0.729
SEW23367.1
Hypothetical protein.
  
     0.726
SEW42411.1
Glycosyl transferase family 2.
  
     0.720
SEW44858.1
Hypothetical protein.
  
    0.715
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.