STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW02859.1ATP-binding cassette, subfamily B. (606 aa)    
Predicted Functional Partners:
SEW02880.1
Undecaprenyl-diphosphatase.
       0.773
SEW02837.1
LysM domain-containing protein.
       0.761
SEW42863.1
ATP-binding cassette, subfamily B.
  
 
0.755
SEV97393.1
ATP-binding cassette, subfamily B.
  
 
0.753
SEW42871.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
  
 
0.747
SEW25903.1
ATP-binding cassette, subfamily B, MsbA.
  
 
0.738
SEW10892.1
Hypothetical protein.
    
 0.712
SEV90261.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
     
0.681
SEW21442.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
    
 0.677
SEW42080.1
Capsular exopolysaccharide family.
    
 0.677
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.