STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW04225.1Phage portal protein, HK97 family. (390 aa)    
Predicted Functional Partners:
SEW04327.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
   0.998
SEW04301.1
Phage major capsid protein, HK97 family.
 
 
 
 0.997
SEW04353.1
Head-tail adaptor.
 
   0.994
SEW04375.1
Protein of unknown function.
 
 
   0.994
SEW04396.1
Phage major tail protein, TP901-1 family.
 
   0.994
SEW04498.1
TIGR02217 family protein.
 
 
   0.992
SEW04521.1
Phage conserved hypothetical protein BR0599.
 
   0.992
SEW04564.1
Putative phage tail protein.
 
   0.992
SEW04276.1
Hypothetical protein.
 
   
 0.969
SEW04201.1
Large terminase phage packaging protein.
    0.967
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.