STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW08367.1Cytochrome c556. (157 aa)    
Predicted Functional Partners:
SEW08343.1
Cytochrome c, mono-and diheme variants.
 
   
 0.964
SEW08318.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.669
SEW08398.1
Coenzyme Q-binding protein COQ10.
 
     0.581
SEW08423.1
2-methylcitrate dehydratase PrpD.
       0.492
SEW19669.1
Cytochrome c.
 
  
 0.463
SEW16768.1
Methanogenic corrinoid protein MtbC1.
   
    0.457
SEW43665.1
Methanogenic corrinoid protein MtbC1.
   
    0.457
SEW02253.1
NADH dehydrogenase subunit L.
   
  
 0.412
SEW24907.1
Ceramidase.
  
     0.411
SEW47588.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.405
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.