STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW10170.1Predicted dithiol-disulfide isomerase, DsbA family. (214 aa)    
Predicted Functional Partners:
SEW17536.1
Arsenate reductase.
   
   0.934
SEW23070.1
Arsenate reductase, glutaredoxin family; Belongs to the ArsC family.
   
   0.934
SEW10189.1
Ion channel.
   
   0.839
SEW10211.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
 
   0.835
SEW10153.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.816
SEW10132.1
Transcriptional regulator, XRE family with cupin sensor.
       0.705
SEV94952.1
Arsenical resistance protein ArsH; Non-canonical start codon; manually curated.
  
    0.470
SEW38644.1
NAD(P)H-dependent FMN reductase.
  
    0.470
SEW10445.1
Disulfide bond formation protein DsbB.
  
  
 0.454
ribB
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
   
   0.414
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.