STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW11999.1Streptomycin 6-kinase. (275 aa)    
Predicted Functional Partners:
SEW12023.1
Protein of unknown function.
       0.773
SEW11975.1
Spermidine/putrescine transport system substrate-binding protein.
       0.588
SEW45688.1
Predicted dehydrogenase.
  
     0.539
SEW45647.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-).
  
     0.508
SEV93767.1
Glyoxylase, beta-lactamase superfamily II.
  
     0.460
SEW11954.1
Transcriptional regulator, GntR family.
       0.449
SEW40626.1
ATPase components of ABC transporters with duplicated ATPase domains.
  
     0.420
SEW45682.1
Sugar phosphate isomerase/epimerase.
  
     0.400
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.