STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW12912.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
SEW42389.1
Hypothetical protein.
  
     0.708
SEW42400.1
Core-2/I-Branching enzyme.
  
     0.708
SEW22009.1
Hypothetical protein.
  
     0.690
SEW39511.1
Hypothetical protein.
  
     0.686
recA
Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.684
SEW31397.1
Sulfotransferase family protein.
  
     0.663
SEW42468.1
ABC-type polysaccharide/polyol phosphate export permease.
  
     0.654
SEW42514.1
Hypothetical protein.
  
     0.652
SEW39500.1
Hypothetical protein.
  
     0.650
SEW42411.1
Glycosyl transferase family 2.
  
     0.649
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.