Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV99507.1 | SEW13000.1 | SAMN04488515_0564 | SAMN04488515_1198 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Tungstate transport system permease protein. | 0.606 |
SEV99507.1 | SEW13046.1 | SAMN04488515_0564 | SAMN04488515_1200 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Tungstate transport system substrate-binding protein. | 0.623 |
SEV99507.1 | SEW39112.1 | SAMN04488515_0564 | SAMN04488515_2555 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB. | 0.556 |
SEV99507.1 | SEW39119.1 | SAMN04488515_0564 | SAMN04488515_2556 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.547 |
SEV99507.1 | SEW40799.1 | SAMN04488515_0564 | SAMN04488515_2744 | NAD-dependent formate dehydrogenase flavoprotein subunit. | Formate dehydrogenase major subunit. | 0.999 |
SEV99507.1 | fdhD | SAMN04488515_0564 | SAMN04488515_2551 | NAD-dependent formate dehydrogenase flavoprotein subunit. | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.866 |
SEW06314.1 | SEW13000.1 | SAMN04488515_0875 | SAMN04488515_1198 | MerR HTH family regulatory protein. | Tungstate transport system permease protein. | 0.567 |
SEW12978.1 | SEW13000.1 | SAMN04488515_1197 | SAMN04488515_1198 | Transcriptional regulator, DeoR family. | Tungstate transport system permease protein. | 0.578 |
SEW12978.1 | SEW13023.1 | SAMN04488515_1197 | SAMN04488515_1199 | Transcriptional regulator, DeoR family. | Tungstate transport system ATP-binding protein. | 0.598 |
SEW12978.1 | SEW13046.1 | SAMN04488515_1197 | SAMN04488515_1200 | Transcriptional regulator, DeoR family. | Tungstate transport system substrate-binding protein. | 0.578 |
SEW13000.1 | SEV99507.1 | SAMN04488515_1198 | SAMN04488515_0564 | Tungstate transport system permease protein. | NAD-dependent formate dehydrogenase flavoprotein subunit. | 0.606 |
SEW13000.1 | SEW06314.1 | SAMN04488515_1198 | SAMN04488515_0875 | Tungstate transport system permease protein. | MerR HTH family regulatory protein. | 0.567 |
SEW13000.1 | SEW12978.1 | SAMN04488515_1198 | SAMN04488515_1197 | Tungstate transport system permease protein. | Transcriptional regulator, DeoR family. | 0.578 |
SEW13000.1 | SEW13023.1 | SAMN04488515_1198 | SAMN04488515_1199 | Tungstate transport system permease protein. | Tungstate transport system ATP-binding protein. | 0.995 |
SEW13000.1 | SEW13046.1 | SAMN04488515_1198 | SAMN04488515_1200 | Tungstate transport system permease protein. | Tungstate transport system substrate-binding protein. | 0.995 |
SEW13000.1 | SEW39112.1 | SAMN04488515_1198 | SAMN04488515_2555 | Tungstate transport system permease protein. | Molybdopterin guanine dinucleotide biosynthesis accessory protein MobB. | 0.547 |
SEW13000.1 | SEW39119.1 | SAMN04488515_1198 | SAMN04488515_2556 | Tungstate transport system permease protein. | Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family. | 0.634 |
SEW13000.1 | SEW40799.1 | SAMN04488515_1198 | SAMN04488515_2744 | Tungstate transport system permease protein. | Formate dehydrogenase major subunit. | 0.733 |
SEW13000.1 | fdhD | SAMN04488515_1198 | SAMN04488515_2551 | Tungstate transport system permease protein. | FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.803 |
SEW13000.1 | pstB | SAMN04488515_1198 | SAMN04488515_1017 | Tungstate transport system permease protein. | Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.590 |
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