STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW13293.1Transcriptional regulator, LacI family. (343 aa)    
Predicted Functional Partners:
SEW41889.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.929
SEW13314.1
Beta-glucosidase.
  
  0.839
SEW13336.1
Glucokinase; Belongs to the bacterial glucokinase family.
 
    0.778
SEW13270.1
Maltose-binding protein /trehalose-binding protein /sucrose-binding protein.
 
     0.775
SEW13247.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
     0.771
SEW13228.1
Maltose ABC transporter membrane protein.
 
     0.708
SEW13206.1
Alpha-glucosidase.
 
 
  0.660
SEW32150.1
Transcriptional regulator, LacI family.
  
     0.624
SEW46442.1
Phosphocarrier protein.
   
 
 0.539
SEW13184.1
Maltose ABC transporter ATP-binding protein.
 
     0.473
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.