STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW13699.1DNA-3-methyladenine glycosylase II. (209 aa)    
Predicted Functional Partners:
SEW14133.1
AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase.
 
 
 0.973
SEW13676.1
Phospholipase/carboxylesterase.
    
 0.945
SEW13720.1
precorrin-6A/cobalt-precorrin-6A reductase.
       0.856
cbiD
cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.856
SEW13820.1
Major Facilitator Superfamily protein.
     
 0.778
SEW05818.1
Exodeoxyribonuclease-3.
  
 0.775
SEW23994.1
Endonuclease/Exonuclease/phosphatase family protein.
  
 0.775
SEW38583.1
Exonuclease III.
  
 0.775
SEW45719.1
Exodeoxyribonuclease-3.
  
 0.775
SEW31453.1
Manually curated.
 
 
 0.693
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.