STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW17924.1Two-component system, OmpR family, response regulator. (222 aa)    
Predicted Functional Partners:
SEW17940.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
 0.989
SEW26607.1
PAS/PAC sensor hybrid histidine kinase.
 0.989
SEW42658.1
Signal transduction histidine kinase.
 
 0.969
SEV97823.1
PAS domain S-box-containing protein.
   
 0.967
SEV99507.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.925
SEW09332.1
Two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR.
 0.899
SEW11278.1
Histidine phosphotransferase ChpT.
   
 0.887
SEW29501.1
Signal transduction histidine kinase.
 
  0.844
SEW45811.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
  0.827
SEW11521.1
Signal transduction histidine kinase.
 
 0.801
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.