STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW18155.1Alkanesulfonate monooxygenase. (386 aa)    
Predicted Functional Partners:
SEW18166.1
Predicted oxidoreductase.
 
     0.964
SEW18178.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.940
SEW18140.1
Transcriptional regulator, GntR family.
 
    0.930
SEW18127.1
Predicted dehydrogenase; Manually curated.
 
     0.923
SEW18187.1
Tripartite ATP-independent transporter, DctQ component.
 
     0.870
SEW30497.1
Taurine transport system permease protein.
 
 
 0.847
SEW30683.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.844
SEW16872.1
Sulfite reductase (NADPH) hemoprotein beta-component.
     
 0.839
SEW18214.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.834
SEW16892.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
  0.824
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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