STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW19148.1Uncharacterized conserved protein YjbJ, UPF0337 family; Belongs to the UPF0337 (CsbD) family. (66 aa)    
Predicted Functional Partners:
SEV88180.1
Protein of unknown function.
  
    0.801
SEW19059.1
Protein of unknown function.
  
    0.801
SEW10288.1
Las17-binding protein actin regulator.
  
    0.690
SEV94707.1
General stress protein 26.
  
    0.625
SEW31052.1
General stress protein 26.
  
    0.625
SEW37697.1
General stress protein 26.
  
    0.604
SEV92102.1
Hypothetical protein.
   
    0.599
SEW19167.1
Hypothetical protein.
       0.578
SEW19132.1
Predicted PurR-regulated permease PerM.
       0.542
SEW46042.1
Hypothetical protein.
   
    0.497
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.