STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW20353.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
SEW20389.1
NADH:ubiquinone oxidoreductase subunit.
 
     0.911
SEW20369.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.856
SEW45708.1
Hypothetical protein.
  
     0.698
SEW43248.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.580
SEW20409.1
Hypothetical protein.
       0.530
SEW43437.1
HemY protein.
  
     0.513
SEW23268.1
Transcriptional regulator, MarR family.
  
     0.501
SEW10445.1
Disulfide bond formation protein DsbB.
 
     0.498
SEW27864.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
     0.494
SEV92251.1
Tellurite resistance protein.
  
     0.459
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.