STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW20369.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (151 aa)    
Predicted Functional Partners:
SEW17370.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.997
SEW30910.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.997
SEW17390.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.996
SEW39327.1
Phospholipid transport system substrate-binding protein.
 
 0.993
SEW30896.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.985
SEW20353.1
Hypothetical protein.
       0.856
SEW20389.1
NADH:ubiquinone oxidoreductase subunit.
       0.856
SEV92743.1
Chemotaxis protein MotB.
   
   0.848
SEW39333.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.836
SEW30884.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
     
 0.834
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.