Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV96210.1 | SEW21202.1 | SAMN04488515_0420 | SAMN04488515_1625 | Transcriptional regulator, TraR/DksA family. | Polyphosphate kinase 2 (PPK2). | 0.811 |
SEV96210.1 | SEW21217.1 | SAMN04488515_0420 | SAMN04488515_1626 | Transcriptional regulator, TraR/DksA family. | Hypothetical protein. | 0.717 |
SEV96210.1 | SEW26665.1 | SAMN04488515_0420 | SAMN04488515_1934 | Transcriptional regulator, TraR/DksA family. | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.599 |
SEV96210.1 | SEW42985.1 | SAMN04488515_0420 | SAMN04488515_3023 | Transcriptional regulator, TraR/DksA family. | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.475 |
SEV96210.1 | SEW43391.1 | SAMN04488515_0420 | SAMN04488515_3074 | Transcriptional regulator, TraR/DksA family. | Predicted RNA-binding protein, contains PUA-like domain. | 0.816 |
SEW21183.1 | SEW21202.1 | SAMN04488515_1624 | SAMN04488515_1625 | Hypothetical protein. | Polyphosphate kinase 2 (PPK2). | 0.576 |
SEW21183.1 | SEW21217.1 | SAMN04488515_1624 | SAMN04488515_1626 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SEW21202.1 | SEV96210.1 | SAMN04488515_1625 | SAMN04488515_0420 | Polyphosphate kinase 2 (PPK2). | Transcriptional regulator, TraR/DksA family. | 0.811 |
SEW21202.1 | SEW21183.1 | SAMN04488515_1625 | SAMN04488515_1624 | Polyphosphate kinase 2 (PPK2). | Hypothetical protein. | 0.576 |
SEW21202.1 | SEW21217.1 | SAMN04488515_1625 | SAMN04488515_1626 | Polyphosphate kinase 2 (PPK2). | Hypothetical protein. | 0.956 |
SEW21202.1 | SEW26665.1 | SAMN04488515_1625 | SAMN04488515_1934 | Polyphosphate kinase 2 (PPK2). | Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family. | 0.491 |
SEW21202.1 | SEW42985.1 | SAMN04488515_1625 | SAMN04488515_3023 | Polyphosphate kinase 2 (PPK2). | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.549 |
SEW21202.1 | SEW43015.1 | SAMN04488515_1625 | SAMN04488515_3027 | Polyphosphate kinase 2 (PPK2). | Cytochrome c oxidase accessory protein FixG. | 0.671 |
SEW21202.1 | SEW43024.1 | SAMN04488515_1625 | SAMN04488515_3028 | Polyphosphate kinase 2 (PPK2). | Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. | 0.491 |
SEW21202.1 | SEW43044.1 | SAMN04488515_1625 | SAMN04488515_3030 | Polyphosphate kinase 2 (PPK2). | Cytochrome c oxidase cbb3-type subunit 2. | 0.509 |
SEW21202.1 | SEW43391.1 | SAMN04488515_1625 | SAMN04488515_3074 | Polyphosphate kinase 2 (PPK2). | Predicted RNA-binding protein, contains PUA-like domain. | 0.497 |
SEW21202.1 | ppk | SAMN04488515_1625 | SAMN04488515_1778 | Polyphosphate kinase 2 (PPK2). | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.821 |
SEW21217.1 | SEV96210.1 | SAMN04488515_1626 | SAMN04488515_0420 | Hypothetical protein. | Transcriptional regulator, TraR/DksA family. | 0.717 |
SEW21217.1 | SEW21183.1 | SAMN04488515_1626 | SAMN04488515_1624 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SEW21217.1 | SEW21202.1 | SAMN04488515_1626 | SAMN04488515_1625 | Hypothetical protein. | Polyphosphate kinase 2 (PPK2). | 0.956 |
page 1 of 3