STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW22617.1Glycine/D-amino acid oxidase. (358 aa)    
Predicted Functional Partners:
SEV98445.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.974
SEW02683.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 0.972
SEW41889.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.797
SEV98424.1
Sarcosine oxidase subunit delta.
 
  0.767
SEW02663.1
Sarcosine oxidase subunit delta.
  
 0.729
SEW02702.1
Sarcosine oxidase subunit gamma.
  
  0.695
SEV98461.1
Sarcosine oxidase subunit gamma.
  
  0.681
SEW41079.1
Glycine/D-amino acid oxidase.
  
  
  0.612
SEW22665.1
Glutamate--putrescine ligase; Belongs to the glutamine synthetase family.
  
 
  0.607
SEW46063.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
  
  0.599
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.