Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV91393.1 | SEW23724.1 | SAMN04488515_0201 | SAMN04488515_1767 | Hypothetical protein. | Protein of unknown function. | 0.409 |
SEW10537.1 | SEW23724.1 | SAMN04488515_1069 | SAMN04488515_1767 | Usg protein (tryptophan operon, function unknown). | Protein of unknown function. | 0.500 |
SEW23682.1 | SEW23706.1 | SAMN04488515_1765 | SAMN04488515_1766 | Polyhydroxybutyrate depolymerase. | Protein of unknown function. | 0.773 |
SEW23682.1 | SEW23724.1 | SAMN04488515_1765 | SAMN04488515_1767 | Polyhydroxybutyrate depolymerase. | Protein of unknown function. | 0.537 |
SEW23706.1 | SEW23682.1 | SAMN04488515_1766 | SAMN04488515_1765 | Protein of unknown function. | Polyhydroxybutyrate depolymerase. | 0.773 |
SEW23706.1 | SEW23724.1 | SAMN04488515_1766 | SAMN04488515_1767 | Protein of unknown function. | Protein of unknown function. | 0.537 |
SEW23724.1 | SEV91393.1 | SAMN04488515_1767 | SAMN04488515_0201 | Protein of unknown function. | Hypothetical protein. | 0.409 |
SEW23724.1 | SEW10537.1 | SAMN04488515_1767 | SAMN04488515_1069 | Protein of unknown function. | Usg protein (tryptophan operon, function unknown). | 0.500 |
SEW23724.1 | SEW23682.1 | SAMN04488515_1767 | SAMN04488515_1765 | Protein of unknown function. | Polyhydroxybutyrate depolymerase. | 0.537 |
SEW23724.1 | SEW23706.1 | SAMN04488515_1767 | SAMN04488515_1766 | Protein of unknown function. | Protein of unknown function. | 0.537 |
SEW23724.1 | SEW46239.1 | SAMN04488515_1767 | SAMN04488515_3468 | Protein of unknown function. | Uncharacterized conserved protein. | 0.445 |
SEW46239.1 | SEW23724.1 | SAMN04488515_3468 | SAMN04488515_1767 | Uncharacterized conserved protein. | Protein of unknown function. | 0.445 |