STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW24138.1Protein of unknown function. (153 aa)    
Predicted Functional Partners:
SEW24100.1
methylmalonyl-CoA mutase.
       0.726
SEW22398.1
Protein of unknown function.
  
     0.668
SEW24121.1
Hypothetical protein.
       0.628
SEW23994.1
Endonuclease/Exonuclease/phosphatase family protein.
 
     0.585
SEW24060.1
Glyoxalase-like domain-containing protein.
       0.585
SEW23976.1
Hypothetical protein.
 
     0.582
SEW07307.1
Yip1 domain-containing protein.
  
     0.581
SEW24078.1
MAPEG family protein.
       0.550
SEW24041.1
Phosphinothricin acetyltransferase.
       0.541
SEW25066.1
Protein of unknown function.
  
     0.508
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.