STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW25345.1Protein of unknown function. (92 aa)    
Predicted Functional Partners:
SEW25365.1
Response regulator receiver modulated diguanylate cyclase.
       0.727
SEW45574.1
Hypothetical protein.
  
     0.538
SEW25943.1
Hypothetical protein.
  
     0.521
SEW10247.1
Hypothetical protein.
  
     0.472
SEW26968.1
ATP phosphoribosyltransferase regulatory subunit.
  
     0.463
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
  
     0.459
SEW25066.1
Protein of unknown function.
  
     0.458
SEV91670.1
SseB protein N-terminal domain-containing protein.
  
     0.450
SEW25286.1
Phosphoglycolate phosphatase.
       0.440
SEV94403.1
Protein of unknown function.
  
     0.432
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.