STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW25365.1Response regulator receiver modulated diguanylate cyclase. (463 aa)    
Predicted Functional Partners:
SEW26607.1
PAS/PAC sensor hybrid histidine kinase.
 0.999
SEW42658.1
Signal transduction histidine kinase.
  
 0.997
SEW39829.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
 0.993
SEV97823.1
PAS domain S-box-containing protein.
 
 0.982
SEV93898.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.960
SEW13360.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
 
 0.914
SEW46135.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.897
SEV94340.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
 0.886
SEW44683.1
Diguanylate cyclase (GGDEF) domain-containing protein.
0.882
SEW44646.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
0.878
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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