STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW26689.1Nucleotide-binding universal stress protein, UspA family. (279 aa)    
Predicted Functional Partners:
SEW26665.1
Heat shock protein Hsp20; Belongs to the small heat shock protein (HSP20) family.
 
    0.676
SEW26643.1
CRP/FNR family transcriptional regulator, nitrogen fixation regulation protein.
 
    0.622
SEW26705.1
Hypothetical protein.
       0.548
SEW26607.1
PAS/PAC sensor hybrid histidine kinase.
 
   
 0.472
SEV88902.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
   
    0.454
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.