Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV91340.1 | SEW04656.1 | SAMN04488515_0198 | SAMN04488515_0802 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.414 |
SEV91340.1 | SEW25305.1 | SAMN04488515_0198 | SAMN04488515_1852 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Reductive dehalogenase. | 0.421 |
SEV91340.1 | SEW27383.1 | SAMN04488515_0198 | SAMN04488515_1970 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.586 |
SEV91340.1 | SEW38107.1 | SAMN04488515_0198 | SAMN04488515_2431 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 7-alpha-hydroxysteroid dehydrogenase. | 0.586 |
SEV91340.1 | lcdH | SAMN04488515_0198 | SAMN04488515_1864 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.555 |
SEW04656.1 | SEV91340.1 | SAMN04488515_0802 | SAMN04488515_0198 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.414 |
SEW04656.1 | SEW25305.1 | SAMN04488515_0802 | SAMN04488515_1852 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Reductive dehalogenase. | 0.630 |
SEW04656.1 | SEW27383.1 | SAMN04488515_0802 | SAMN04488515_1970 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.561 |
SEW04656.1 | SEW27425.1 | SAMN04488515_0802 | SAMN04488515_1972 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.882 |
SEW04656.1 | SEW38107.1 | SAMN04488515_0802 | SAMN04488515_2431 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 7-alpha-hydroxysteroid dehydrogenase. | 0.561 |
SEW04656.1 | SEW41889.1 | SAMN04488515_0802 | SAMN04488515_2893 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Glutamate synthase (NADPH/NADH) large chain. | 0.939 |
SEW04656.1 | lcdH | SAMN04488515_0802 | SAMN04488515_1864 | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.609 |
SEW24437.1 | SEW27383.1 | SAMN04488515_1804 | SAMN04488515_1970 | Choline-sulfatase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.568 |
SEW24437.1 | SEW38107.1 | SAMN04488515_1804 | SAMN04488515_2431 | Choline-sulfatase. | 7-alpha-hydroxysteroid dehydrogenase. | 0.568 |
SEW25305.1 | SEV91340.1 | SAMN04488515_1852 | SAMN04488515_0198 | Reductive dehalogenase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.421 |
SEW25305.1 | SEW04656.1 | SAMN04488515_1852 | SAMN04488515_0802 | Reductive dehalogenase. | Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.630 |
SEW25305.1 | SEW27383.1 | SAMN04488515_1852 | SAMN04488515_1970 | Reductive dehalogenase. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.635 |
SEW25305.1 | SEW27425.1 | SAMN04488515_1852 | SAMN04488515_1972 | Reductive dehalogenase. | Dimethylglycine dehydrogenase; Belongs to the GcvT family. | 0.730 |
SEW25305.1 | SEW38107.1 | SAMN04488515_1852 | SAMN04488515_2431 | Reductive dehalogenase. | 7-alpha-hydroxysteroid dehydrogenase. | 0.635 |
SEW25305.1 | SEW41889.1 | SAMN04488515_1852 | SAMN04488515_2893 | Reductive dehalogenase. | Glutamate synthase (NADPH/NADH) large chain. | 0.648 |
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