STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW28230.1Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
SEW28212.1
Hypothetical protein.
 
     0.966
SEW28006.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.831
SEW28173.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.677
SEV92723.1
Hypothetical protein.
  
     0.616
SEW28102.1
Nucleoside-binding protein.
       0.602
SEW22061.1
Hypothetical protein.
  
     0.542
SEW28196.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.504
SEW28147.1
Nucleoside ABC transporter ATP-binding protein.
       0.495
SEW28127.1
SnoaL-like domain-containing protein.
       0.466
SEV88981.1
Hypothetical protein.
  
     0.457
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.