STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW29705.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SEW29714.1
Hypothetical protein.
       0.773
SEW29728.1
ATPase family associated with various cellular activities (AAA).
       0.773
SEW29646.1
Protein of unknown function.
       0.727
SEW29660.1
Hypothetical protein.
       0.727
SEW29679.1
Hypothetical protein.
       0.727
SEW29691.1
Hypothetical protein.
       0.727
SEW29742.1
Hypothetical protein.
       0.631
SEW29750.1
Hypothetical protein.
       0.631
SEW29761.1
Hypothetical protein.
       0.631
SEW29773.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
       0.423
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.