Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEV87781.1 | SEW30269.1 | SAMN04488515_0018 | SAMN04488515_2144 | Trehalase. | Phosphoglucomutase. | 0.894 |
SEV87781.1 | glgA | SAMN04488515_0018 | SAMN04488515_2146 | Trehalase. | Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.540 |
SEV87781.1 | glgB | SAMN04488515_0018 | SAMN04488515_2148 | Trehalase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.885 |
SEW30269.1 | SEV87781.1 | SAMN04488515_2144 | SAMN04488515_0018 | Phosphoglucomutase. | Trehalase. | 0.894 |
SEW30269.1 | SEW30284.1 | SAMN04488515_2144 | SAMN04488515_2145 | Phosphoglucomutase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.969 |
SEW30269.1 | SEW42430.1 | SAMN04488515_2144 | SAMN04488515_2962 | Phosphoglucomutase. | UDP-glucose pyrophosphorylase. | 0.936 |
SEW30269.1 | glgA | SAMN04488515_2144 | SAMN04488515_2146 | Phosphoglucomutase. | Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.980 |
SEW30269.1 | glgB | SAMN04488515_2144 | SAMN04488515_2148 | Phosphoglucomutase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.980 |
SEW30269.1 | glgC | SAMN04488515_2144 | SAMN04488515_2147 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.991 |
SEW30269.1 | pgi | SAMN04488515_2144 | SAMN04488515_1224 | Phosphoglucomutase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.986 |
SEW30269.1 | rpiA | SAMN04488515_2144 | SAMN04488515_1688 | Phosphoglucomutase. | Ribose-5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate. | 0.901 |
SEW30269.1 | tal | SAMN04488515_2144 | SAMN04488515_0085 | Phosphoglucomutase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.937 |
SEW30269.1 | zwf | SAMN04488515_2144 | SAMN04488515_1226 | Phosphoglucomutase. | Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. | 0.932 |
SEW30284.1 | SEW30269.1 | SAMN04488515_2145 | SAMN04488515_2144 | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | Phosphoglucomutase. | 0.969 |
SEW30284.1 | SEW42430.1 | SAMN04488515_2145 | SAMN04488515_2962 | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | UDP-glucose pyrophosphorylase. | 0.559 |
SEW30284.1 | glgA | SAMN04488515_2145 | SAMN04488515_2146 | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.998 |
SEW30284.1 | glgB | SAMN04488515_2145 | SAMN04488515_2148 | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.999 |
SEW30284.1 | glgC | SAMN04488515_2145 | SAMN04488515_2147 | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.998 |
SEW42430.1 | SEW30269.1 | SAMN04488515_2962 | SAMN04488515_2144 | UDP-glucose pyrophosphorylase. | Phosphoglucomutase. | 0.936 |
SEW42430.1 | SEW30284.1 | SAMN04488515_2962 | SAMN04488515_2145 | UDP-glucose pyrophosphorylase. | Glycogen operon protein; Belongs to the glycosyl hydrolase 13 family. | 0.559 |
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