STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW30847.1N-terminal double-transmembrane domain-containing protein. (921 aa)    
Predicted Functional Partners:
SEW30835.1
Protein of unknown function DUF58.
 
    0.966
SEW30858.1
Hypothetical protein.
 
     0.966
SEW11180.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
   
 0.962
SEW30823.1
MoxR-like ATPase.
 
     0.881
SEW30811.1
Hypothetical protein.
 
     0.838
SEW38803.1
TIGR02302 family protein.
  
     0.774
SEW26907.1
Hypothetical protein.
  
     0.692
SEW13863.1
Squalene/phytoene synthase.
 
 
 0.675
SEV99301.1
Tetratricopeptide repeat-containing protein.
  
     0.657
SEW12232.1
Cytochrome P450.
    
 0.585
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.