STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW30910.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (373 aa)    
Predicted Functional Partners:
SEW17390.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SEW30884.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.999
SEW30896.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 0.999
SEW20369.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.997
SEW39327.1
Phospholipid transport system substrate-binding protein.
  
 
 0.981
SEW30871.1
Cholesterol transport system auxiliary component.
 
 
  0.976
SEW17370.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
0.784
SEW42350.1
Lipopolysaccharide export system ATP-binding protein.
  
  0.693
SEW39333.1
Phospholipid-binding lipoprotein MlaA.
     
 0.652
SEV92030.1
Putative ABC transport system ATP-binding protein; Manually curated.
 
 
  0.597
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.