STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEW31977.1Maleate isomerase. (256 aa)    
Predicted Functional Partners:
SEW31988.1
Xaa-Pro aminopeptidase.
 
     0.947
SEW32001.1
Diaminopropionate ammonia-lyase.
 
     0.941
SEW47476.1
Nicotinamidase-related amidase.
    
 0.853
SEW28567.1
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
   
 
  0.826
SEW17797.1
Tricarballylate dehydrogenase.
   
 
  0.821
SEW32382.1
Ectoine hydrolase.
 
     0.527
SEW32010.1
SnoaL-like polyketide cyclase.
       0.523
SEW01547.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
     0.507
SEW05543.1
Xaa-Pro dipeptidase.
 
     0.496
SEW46067.1
Transcriptional regulator, TetR family.
  
     0.486
Your Current Organism:
Cognatiyoonia koreensis
NCBI taxonomy Id: 364200
Other names: C. koreensis, CIP 109899,, DSM 17925, KACC 11519, Loktanella koreensis, Loktanella koreensis Weon et al. 2006, strain GA2-M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.